PUBLICATIONS

Journal Publications

2024

  1. C. O’Hern, S. Caywood, S. Aminova, A. Kiselev, B. Volmert, F. Wang, M. Sewavi, W. Cao, M. Dionise, P. Muniyandi, M. Popa, H. Basrai, M. Skoric, G. Boulos, A. Huang, I. Nuñez-Regueiro, N. Chalfoun, S. Park, C. Zhou, C. Contag, A. Aguirre, Human heart assembloids with autologous tissue-resident macrophages recreate physiological immuno-cardiac interactions, bioRxiv 2024.11.13.623051, 2024. (LINK)
  2. H. Nie, H. Luo, V. Lamm, S. Li, S. Thakur, C. Zhou, T. Hollander, D. Cho, E. Sloan, J. Liu, P. Navale, A. N. Bazarbashi, J. P. R. Genere, V. M. Kushnir, Q. Zhu, In vivo evaluation of complex polyps with endoscopic optical coherence tomography and deep learning during routine colonoscopy: a feasibility study, Scientific Reports, 14, 27930, 2024. (LINK)
  3. F. Wang, C. Zhou, ‘Transparent mice’: deep-tissue live imaging using food dyes, Communications Biology, 7, 1307, 2024. (LINK)
  4. C. Wang, J. Wang, M. Zhou, V. Pham, S. Hao, C. Zhou, N. Zhang, N. Raviv, Secure Information Embedding and Extraction in Forensic 3D Fingerprinting, arXiv:2403.04918, 2024. (LINK)
  5. E. Gracheva, Y. Wang, J. Zhu, F. Wang, A. Matt, M. Fishman, H. Liang, C. Zhou, Dual color optogenetic tool enables heart arrest, bradycardic, and tachycardic pacing in Drosophila melanogaster, Communications Biology, 7, 1056, 2024. (LINK)
  6. X. Ouyang*, A. Matt*, F. Wang, E. Gracheva, E. Migunova, S. Rajamani, E. B. Dubrovsky, C. Zhou, Attention LSTM U-Net model for Drosophila melanogaster heart tube segmentation in optical coherence microscopy images, Biomed. Opt. Express, 15, 3639-3653, 2024. (LINK)
  7. Y. Shen, J. V. Jethe, J. Hehir, M. M. Amaral, C. Ren, S. Hao, C. Zhou, J. A. N. Fisher, Label free, capillary-scale blood flow mapping in vivo reveals that low intensity focused ultrasound evokes persistent dilation in cortical microvasculature, Preprint, bioRxiv, 2024.
  8. C. Ren, S. Hao, F. Wang, A. Matt, M. M. Amaral, D. Yang, L. Wang, C. Zhou, Dynamic Contrast Optical Coherence Tomography (DyC-OCT) for Label-free Live Cell Imaging, Communications Biology, 7, 278, 2024. (LINK)

2023

  1. M. Fishman*, A. Matt*, F. Wang, E. Gracheva, J. Zhu, X. Ouyang, A. Komarov, Y. Wang, H. Liang, and C. Zhou, A Drosophila heart optical coherence microscopy dataset for automatic video segmentation, Scientific Data 10, 886, 2023. (LINK)
  2. B. Volmert, A. Kiselev, A. Juhong, F. Wang, A. Riggs, A. Kostina, C. O’Hern, P. Muniyandi, A. Wasserman, A. Huang, Y. Lewis-Israeli, V. Panda, S. Bhattacharya, A. Lauver, S. Park, Z. Qiu, C. Zhou, A. Aguirre, A patterned human primitive heart organoid model generated by pluripotent stem cell self-organization. Nature Communications, 14, 8245 2023. (LINK)
  3. R. M. Karvas, J. E. Zemke, S. S. Ali, E. Upton, E. Sane, L. A. Fischer, C. Dong, K. Park, F. Wang, K. Park, S. Hao, B. Chew, B. Meyer, C. Zhou, S. Dietmann, and T. W. Theunissen, 3D-cultured blastoids model human embryogenesis from pre-implantation to early gastrulation stages, Cell Stem Cell 30, 1148-1165.e7, 2023. (LINK)
  4. S. Hao, C. Ren, F. Wang, K. Park, B. D. Volmert, A. Aguirre, and C. Zhou, Dual-modality imaging system for monitoring human heart organoids beating in vitro, Opt. Lett., 48(15), 3929–3932, 2023. (LINK)
  5. S. Hao, M. M. Amaral, and C. Zhou, High dynamic range 3D motion tracking using circular scans with optical coherence tomography, Biomed. Opt. Express, 14, 3881–3898, 2023. (LINK)
  6. M. Magri Amaral, A. Sun, Y. Li, C. Ren, A. Truong, S. Nigam, Z. Jiao, P. Wang, C. Zhou, Three-dimensional imaging and quantification of mouse ovarian follicles via optical coherence tomography. Biomedical Optics Express, 14, 3213-3224, 2023. (LINK)
  7. E. Migunova, S. Rajamanim S. Bonannim F. Wang, C. Zhou, E. Dubrovsky, Cardiac RNase Z edited via CRISPR-Cas9 drives heart hypertrophy in Drosophila, PLoS ONE, 18:5, 2023. (LINK)

2022

  1. E. Gracheva, F. Wang, A. Matt, H. Liang, M. Fishman, C. Zhou. Developing Drosophila melanogaster Models for Imaging and Optogenetic Control of Cardiac Function. Journal of Visualized Experiments: Jove, (186), 2022. (LINK)
  2. Y. Ming, S. Hao, F. Wang, Y.R. Lewis-Israeli, B.D. Volmert, Z. Xu, A. Goestenkors, A. Aguirre, C. Zhou, Longitudinal Morphological and Functional Characterization of Human Heart Organoids Using Optical Coherence Tomography Biosensors and Bioelectronics, 114136, 2022. (LINK)
  3. H. Luo, S. Li, Y. Zeng, H. Cheema, E. Otegbeye, S. Ahmed, W.C. Chapman Jr, M. Mutch, C. Zhou, Q. Zhu, Human colorectal cancer tissue assessment using optical coherence tomography catheter and deep learning. Journal of Biophotonics, 15:6, 2022. (LINK)

2021

  1. C. Gregori-Pla, R. C. Mesquita, C. G. Favilla, D. R. Busch, I. Blanco, P. Zirak, L. Kobayashi Frisk, S. Avtzi, F. Maruccia, G. Giacalone, G. Cotta, P. Camps-Renom, M. T. Mullen, J. Martí-Fàbregas, L. Prats-Sánchez, A. Martínez-Domeño, S. E. Kasner, J. H. Greenberg, C. Zhou, B. L. Edlow, M. E. Putt, J. A. Detre, A. G. Yodh, T. Durduran and R. Delgado-Mederos, Blood flow response to orthostatic challenge identifies signatures of the failure of static cerebral autoregulation in patients with cerebrovascular disease, BMC Neurology, 21:154, 2021. (LINK)
  2. E. Migunova, J. Theophilopoulos, M. Mercadante, J. Men, C. Zhou, E. B. Dubrovsky, ELAC2/RNaseZ linked cardiac hypertrophy in Drosophila melanogaster, 14(8):dmm048931, Disease Models & Mechanisms, 2021. (LINK)
  3. Y. R. Lewis-Israeli, A. H. Wasserman, M. A. Gabalski, B. D. Volmert, Y. Ming, K. A. Ball, W. Yang, J. Zou, G. Ni, N. Pajares, X. Chatzistavrou, W. Li, C. Zhou and A. Aguirre, Self-assembling Human Heart Organoids for the Modeling of Cardiac Development and Congenital Heart Disease, Nature Communications, 12, 5142, 2021. (LINK)

2020

  1. Y. Huang, J. Jerwick, G. Liu, C. Zhou, Full-Range Space-Division Multiplexing Optical Coherence Tomography Angiography, 11(8), 4817-4834, 2020. (LINK)
  2. J. Men, A. Li, J. Jerwick, Z. Li, R. E. Tanzi, C. Zhou, Non-invasive red-light optogenetic control of Drosophila cardiac function, Communications Biology, 3, 336, 2020. (LINK)
  3. Z. Dong, J. Men, Z. Yang, J. Jerwick, A. Li, R. E. Tanzi, C. Zhou, FlyNet 2.0: Drosophila Heart 3D (2D + time) Segmentation in Optical Coherence Microscopy Images using a Convolutional Long Short-term Memory Neural Network, Biomedical Optics Express, 11(3), 1568-1579, 2020.(LINK)
  4. J. Jerwick, Y. Huang, Z. Dong, A. Slaudades, A. Brucker, C. Zhou, Wide-field Ophthalmic Space-Division Multiplexing Optical Coherence Tomography, Photonics Research, 8(4), 539-547, 2020. (LINK)
  5. Z. Dong, G. Liu, G. Ni, J. Jerwick, L. Duan, C. Zhou, Optical coherence tomography image denoising using a generative adversarial network with speckle modulation, Journal of Biophotonics, e201960135, 2020. (LINK)

2019

  1. W. Shi, L. Reid, Y. Huang, C.G. Uhl, R. He, C. Zhou, and Y. Liu, Bi-layer blood vessel mimicking microfluidic platform for tumor drug screening based on co-culturing 3D tumor spheroids and endothelial layers, Biomicrofluidics, 13, 044108, 2019. (LINK)(PDF)
  2. K. Derr, J. Zou, K. Luo, M. J. Song, G. S. Sittampalam, C. Zhou, S. Michael, M. Ferrer, and P. Derr, Fully three-dimensional bioprinted skin equivalent constructs with validated morphology and barrier function, Tissue Engineering Part C: Methods, vol. 25, no. 6, pp. 334-343, 2019.  (LINK)(PDF)(Journal Cover)
  3. Y. Ma, T. Xu, X. Huang, X. Wang, C. Li, Y. Ning, X. Zeng, B. Wang, Z. Zhang, X. Zhang, and C. Zhou, Computer-Aided Diagnosis of Label-Free 3-D Optical Coherence Microscopy Images of Human Cervical Tissue, IEEE Transactions on Biomedical Engineering, 66(9):2447-2456, 2019.(LINK)(PDF)
  4. Y. Huang, J. Zou, M. Badar, J. Liu, W. Shi, S. Wang, Q. Guo, X. Wang, S. Kessel, L. L.-Y. Chan, P. Li, Y. Liu, J. Qiu, C. Zhou, Longitudinal Morphological and Physiological Monitoring of Three-dimensional Tumor Spheroids using Optical Coherence Tomography, Journal of Visualized Experiments (JoVE), 144; e59020, 2019.(LINK)(PDF)

2018

  1. H. Huang, Y. Huang, W. Lau, H.D. Ou-Yang, C. Zhou and M.S. El-Aasser, Integrating Optical Coherence Tomography with gravimetric and video analysis (OCT-Gravimetry-Video method) for studying the drying process of waterborne latex, Scientific Reports, 8, 12962, 2018.(LINK)(PDF)
  2. L. Duan, X. Qin, Y. He, X. Sang, J. Pan, T. Xu, J. Men, Y. Ma, C. Zhou, Segmentation on optical coherence microscopy fly heart images using convolutional neural networks, Journal of Biophotonics, e201800146, 2018.(LINK)(PDF)(Journal of Biophotonics Cover)
  3. X. Zeng, X. Zhang, C. Li, X. Wang, J. Jerwick, T. Xu, Y. Ning, Y. Wang, L. Zhang, Z. Zhang, Y. Ma and C. Zhou, Ultrahigh-resolution optical coherence microscopy accurately classifies precancerous and cancerous human cervix free of labeling, Theranostics, 8(11), 3099-3110, 2018.(LINK)(PDF)(Journal Cover)
  4. W. Shi, J. Kwon, Y. Huang, J. Tan, C. Uhl, R. He, C. Zhou, Y. Liu, Facile Tumor Spheroids Formation in Large Quantity with Controllable Size and High Uniformity, Scientific Reports, 8; 6837, 2018.(LINK)(PDF)

2017

  1. Y. Huang, S. Wang, S. Kessel, I. Rubinoff, Y. Liu, P. Li, J. Qiu, L. L.-Y. Chan, and C. Zhou, Optical coherence tomography detects necrotic regions and volumetrically quantifies multicellular tumor spheroids, Cancer Research, 77(21); 601120, 2017.(LINK)(PDF)
  2. Y. Huang, M. Badar, A. Nitkowski, A. Weinroth, N. Tansu, and C. Zhou, Wide-field high-speed space-division multiplexing optical coherence tomography using an integrated photonic device, Biomed. Opt. Express, 8(8), 3856-3867, 2017.(LINK)(PDF)
  3. Davidson, Z.S., Huang, Y., Gross, Adam., Martinez, A., Still, T., Zhou, C., Collings, P.J., Kamien, R.D., Yodh, A.G., Deposition and drying dynamics of liquid crystal droplets. Nature communications, 8:15642, 2017.(LINK)(PDF)
  4. Wan, S., Lee, H.C., Huang, X., Xu, T., Xu, T., Zeng, X., Zhang, Z., Sheikine, Y., Connolly, J.L., Fujimoto, J.G. and Zhou, C., Integrated Local Binary Pattern Texture Features for Classification of Breast Tissue Imaged by Optical Coherence Microscopy. Medical Image Analysis, 2017.(LINK)(PDF)

2016

  1. Men, J., Jerwick, J., Wu, P., Chen, M., Alex, A., Ma, Y., Tanzi, R.E., Li, A. and Zhou, C., Drosophila Preparation and Longitudinal Imaging of Heart Function In Vivo Using Optical Coherence Microscopy (OCM). JoVE (Journal of Visualized Experiments), (118), pp.e55002-e55002, 2016.(LINK)(PDF)
  2. Men, J., Huang, Y., Solanki, J., Zeng, X., Alex, A., Jerwick, J., Zhang, Z., Tanzi, R.E., Li, A. and Zhou, C., Optical coherence tomography for brain imaging and developmental biology. IEEE Journal of Selected Topics in Quantum Electronics, 22(4), 120-132, 2016.(LINK)(PDF)

2015

  1. A. Alex, A. Li, R.E. Tanzi, C. Zhou, Optogenetic pacing in Drosophila melanogaster, Science Advances, 1:e1500639, 2015.(LINK)(PDF)
  2. A. Alex, A. Li, X. Zeng, R. E. Tate, M. L. McKee, D. E. Capen, Z. Zhang, R. E. Tanzi, and C. Zhou, A circadian clock gene, Cry, affects heart morphogenesis and function in Drosophila as revealed by optical coherence microscopy, PLOS ONE, 10(9): e0137236, 2015.(LINK)(PDF)

2014

  1. Fengqiang Li, Yu Song, Alexandra Dryer, William Cogguillo, Yevgeny Berdichevsky, Chao Zhou, Nondestructive evaluation of progressive neuronal changes in organotypic rat hippocampal slice cultures using ultrahigh-resolution optical coherence microscopy, Neurophotonics 1(2), 025002, 2014.(PDF)
  2. Aneesh Alex, Mario Noti, Elia D. Tait Wojno, David Artis, C. Zhou, Characterization of eosinophilic esophagitis murine models using optical coherence tomography, Biomedical Optics Express, 5(2), 609-620, 2014.(PDF)
  3. Fengqiang Li, Ting Xu, Duc-Huy T. Nguyen, Xiaolei Huang, Christopher S. Chen, C. Zhou, Label-free evaluation of angiogenic sprouting in micro-engineered devices using ultrahigh-resolution optical coherence microscopy, Journal of Biomedical Optics 19(1), 016006, 2014.(PDF)

2013

  1. C. Zhou, A. Alex, J. Rasakanthan, and Y. Ma, Space-division multiplexing optical coherence tomography, Opt. Express, 21(16), 19219-19227, 2013.(PDF)
  2. M. Noti, E. D. Tait Wojno, B. S. Kim, M. C. Siracusa, P. R. Giacomin, M. G. Nair, A. J. Benitez, K. R. Ruymann, A. B. Muir, D. A. Hill, K. R. Chikwava, A. E. Moghaddam, Q. J. Sattentau, A. Alex, C. Zhou, J. H. Yearley, P. Menard-Katcher, M. Kubo, K. Obata-Ninomiya, H. Karasuyama, M. R. Comeau, T. Brown-Whitehorn, R. de Waal Malefyt, P. M. Sleiman, H. Hakonarson, A. Cianferoni, G. W. Falk, M.-L. Wang, J. M. Sperge, and D. Artis, Thymic stromal lymphopoietin-elicited basophil responses can mediate the pathogenesis of eosinophilic esophagitis. Nat. Medicine, 19(8), 1005-1013, 2013.(PDF)
  3. A. Li, O.O. Ahsen, J.J. Liu, C. Du, M.L. McKee, W. Wasco, C.H. Newton-Cheh, C.J. O’Donnell, J.G. Fujimoto, C. Zhou,* and R.E. Tanzi,* Silencing Of The Drosophila Ortholog Of SOX5 In Heart Leads To Cardiac Dysfunction As Detected By Optical Coherence Tomography. Hum. Mol. Genet., DOI: 10.1093/hmg/ddt230, 2013, (*: Co-corresponding author).(PDF)
  4. R.C. Mesquita, M. Putt, M. Chandra, G. Yu, X. Xing, S.W. Han, G. Lech, Y. Shang, T. Durduran, C. Zhou, A.G. Yodh, and E.R. Mohler III, Diffuse optical characterization of an exercising patient group with peripheral artery disease, J. Biomed. Opt., 18(5):057007, 2013.(PDF)
  5. T.-H. Tsai, B. Potsaid, Y.K. Tao, V. Jayaraman, J. Jiang, P.J. S. Heim, M.F. Kraus, C. Zhou, J. Hornegger, H. Mashimo, A.E. Cable, and J.G. Fujimoto, Ultrahigh speed endoscopic optical coherence tomography using micromotor imaging catheter and VCSEL technology, Biomed. Opt. Express, 4(7), 1119-1132, 2013.(PDF)

2012 and Before

  1. T.-H. Tsai, C. Zhou, Y.K. Tao, H.-C. Lee, O.O. Ahsen, M. Figueiredo, T. Kirtane, D.C. Adler, J. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo. Structural Markers Observed with Endoscopic Three-dimensional Optical Coherence Tomography Correlating with Barrett’s Esophagus Radiofrequency Ablation Treatment Response. Gastrointest. Endosc., 76(6):1104-1112, 2012.(PDF)
  2. T.-H. Tsai, C. Zhou, H.-C. Lee, Y.K. Tao, O.O. Ahsen, M. Figueiredo, D.C. Adler, J. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo, Comparison of Tissue Architectural Changes between Radiofrequency Ablation and Cryospray Ablation in Barrett�s Esophagus using Endoscopic Three-Dimensional Optical Coherence Tomography. Gastroenterol. Res. Pract., 2012:684832, 2012.(PDF)
  3. C. Zhou, T.-H. Tsai, H.-C. Lee, T. Kirtane, M. Figueiredo, Y.K. Tao, O.O. Ahsen, D.C. Adler, J. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo. Characterization of Buried Glands Pre- and Post-Radiofrequency Ablation using Three-dimensional Optical Coherence Tomography. Gastrointest. Endosc., 76(1):32-40, 2012.(PDF)
  4. V. Sebastian, S.-K. Lee, C. Zhou, M.F. Kraus, J.G. Fujimoto, and K.F. Jensen. One-step Continuous Synthesis of Biocompatible Gold Nanorods for Optical Coherence Tomography. Chem. Commun., 48:6654-6656, 2012.(PDF)
  5. C. Zhou, T. Kirtane, T.-H. Tsai, H.-C. Lee, D.C. Adler, J.M. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo. Cervical Inlet Patch – Optical Coherence Tomography Imaging and Clinical Significance. World J. Gastroenterol., 18(20):2502-2510, 2012.(PDF)
  6. H.-C. Lee, C. Zhou, D.W. Cohen, Y. Wang, A. Mondelblatt, T.-H. Tsai, A.D. Aguirre, J.G. Fujimoto, and J.L. Connolly. Integrated Optical Coherence Tomography and Optical Coherence Microscopy Imaging of Human Renal Tissue. J. Urology, 187:691-699, 2012.(PDF)
  7. C. Zhou, T. Kirtane, T.-H. Tsai, H.-C. Lee, D.C. Adler, J. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo. Three-Dimensional Endoscopic Optical Coherence Tomography Imaging of Cervical Inlet Patch. Gastrointest. Endosc., 75(3), 675-677, 2012.(PDF)
  8. Y. Chen, S.-W. Huang, C. Zhou, B. Potsaid, and J.G. Fujimoto. Improved Detection Sensitivity Line-Scanning Optical Coherence Microscopy (LS-OCM). IEEE J. Sel. Top. Quantum Electron., 18(3): 1094-1099, 2012.(PDF)
  9. R.C. Mesquita, T. Durduran, G.Q. Yu, E.M. Buckley, M.N. Kim, C. Zhou, R. Choe, U. Sunar, A.G. Yodh. Direct Measurement of Tissue Blood Flow and Metabolism with Diffuse Optics. Phil. Trans. Royal Soc. A, 369, 4390-4406, 2011.(PDF)
  10. T.-H. Tsai, B. Potsaid, M. F. Kraus, C. Zhou, Y.K. Tao, J. Hornegger, and J.G. Fujimoto. Piezoelectric Transducer Based Miniature Catheter for Ultrahigh Speed Endoscopic Optical Coherence Tomography. Biomed. Opt. Express, 2, 2438-2448, 2011.(PDF)
  11. A. Li, C. Zhou, J. Moore, P. Zhang, T.-H. Tsai, H.-C. Lee, D.M. Romano, M.L. McKee, D.A. Schoenfeld, M.J. Serra, K. Raygor, H.F. Cantiello, J.G. Fujimoto, and R.E. Tanzi. Changes in the Expression of the Alzheimer’s Disease-Associated Presenilin Gene in Drosophila Heart Leads to Cardiac Dysfunction. Curr. Alzheimer Res., 8(3):313-322, 2011.(PDF)
  12. B. Garita, M.W. Jenkins, M. Han, C. Zhou, M. VanAuker, A.M. Rollins, M. Watanabe, J.G. Fujimoto, and K.K. Linask. Blood Flow Dynamics of One Cardiac Cycle and Relationship to Mechanotransduction and Trabeculation during Heart Looping. Amer. J. Physiol. – Heart, 300(3): H879-H891, 2011.(PDF)
  13. C. Zhou, D.W. Cohen, Y. Wang, H.-C. Lee, A. Mondelblatt, T.-H. Tsai, A.D. Aguirre, J.G. Fujimoto, and J.L. Connolly. Integrated Optical Coherence Tomography and Microscopy for Ex Vivo Multiscale Evaluation of Human Breast Tissues. Cancer Res., 70(24):10071-10079, 2010.(PDF)
  14. C. Zhou, Y.H. Wang, A.D. Aguirre, T.-H. Tsai, J.L. Connolly, and J.G. Fujimoto. Ex vivo Imaging of Human Thyroid Pathology Using Integrated Optical Coherence Tomography (OCT) and Optical Coherence Microscopy (OCM). J. Biomed. Opt., 15(1):016001, 2010.(PDF)
  15. C. Zhou, T.-H. Tsai, D.C. Adler, H-C. Lee, D.W. Cohen, A. Mondelblatt, Y.H. Wang, J.L. Connolly and J.G. Fujimoto. Photothermal Optical Coherence Tomography (OCT) in ex vivo Human Breast Tissues Using Gold Nanoshells. Opt. Lett., 35(5):700-702, 2010.(PDF)
  16. T. Durduran, C. Zhou, E.M. Buckley, M.N. Kim, G.Q. Yu, R. Choe, W.J. Gaynor, T.L. Spray, S.M Durning, S.E. Mason, L.M. Montenegro, S.C. Nicolson, R.A. Zimmerman, M.E. Putt, J.J. Wang, J.H. Greenberg, J.A. Detre, A.G. Yodh, and D.J. Licht. Optical measurement of cerebral hemodynamics and oxygen metabolism in neonates with congenital heart defects. J. Biomed. Opt., 15(3):037004, 2010.(PDF)
  17. D.C. Adler, C. Zhou, T.-H. Tsai, H.-C. Lee, L. Becker, J.M. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo. Biased assessment of 3D optical coherence tomography in a single post-radiofrequency ablation patient without histological correlation Reply. Endoscopy, 42(2):180-181, 2010.(PDF)
  18. A.D. Aguirre, J. Sawinksi, S.-W. Huang, C. Zhou, W. Denk, and J.G. Fujimoto. High Speed Optical Coherence Microscopy with Autofocus Adjustment and a Miniaturized Endoscopic Imaging Probe. Opt. Express, 18(5):4222-4239, 2010.(PDF)
  19. B.L. Edlow, M.N. Kim, T. Durduran, C. Zhou, M.E. Putt, A.G. Yodh, J.H. Greenberg, and J.A. Detre. The Effect of Healthy Aging on Cerebral Hemodynamic Responses to Posture Change. Physiol. Meas., 31(4):477-495, 2010.(PDF)
  20. M.N. Kim, T. Durduran, S. Frangos, B.L. Edlow, E.M. Buckley, H.E. Moss, C. Zhou, G.Q. Yu, R. Choe, E. Maloney-Wilensky, R.L. Wolf, M.S. Grady, J.H. Greenberg, J.M. Levine, A.G. Yodh, J.A.Detre, and W.A. Kofke. Noninvasive Measurement of Cerebral Blood Flow and Blood Oxygenation Using Near-Infrared and Diffuse Correlation Spectroscopies in Critically Brain-Injured Adults. Neurocrit. Care, 12(2):173-180, 2010.(PDF)
  21. C. Zhou, S.A. Eucker, T. Durduran, G.Q. Yu, J. Ralston, S.H. Friess, R.N. Ichord, S.S. Margulies, and A.G. Yodh. Diffuse optical monitoring of hemodynamics in piglet brain with head trauma injury. J. Biomed. Opt., 14 (3):034015, 2009.(PDF)
  22. J. Luckl, C. Zhou, T. Durduran, A.G. Yodh, and J.H. Greenberg. Characterization of peri-infarct flow transients with laser speckle and Doppler after middle cerebral artery occlusion in the rat. J. Neurosci. Res., 87(5):1219-1229, 2009.(PDF)
  23. D.C. Adler, C. Zhou, T.-H. Tsai, J. Schmitt, Q. Huang, H. Mashimo, and J.G. Fujimoto. Three-dimensional endomicroscopy of the human colon using optical coherence tomography, Opt. Express, 17(2):784-796, 2009.(PDF)
  24. C. Zhou, D.C. Adler, L. Becker, Y. Chen, T.-H. Tsai, M. Figueiredo, J.M. Schmitt, J.G. Fujimoto, and H. Mashimo. Effective treatment of chronic radiation proctitis using radiofrequency ablation. Ther. Adv. Gastroenterol., 2(3):149-156, 2009.(PDF)
  25. T. Durduran, C. Zhou, B.L. Edlow, G.Q. Yu, R. Choe, B.L. Cucchiara, M. Putt, Q. Shah, S.E. Kasner, J.H. Greenberg, A.G. Yodh, and J.A. Detre. Transcranial Optical Monitoring of Cerebral Blood Flow and Hemoglobin Concentration in Acute Stroke Patients during Positional Interventions. Opt. Express, 17(5):3884-3902, 2009.(PDF)
  26. D.C. Adler, C. Zhou, T.-H. Tsai, H.-Chieh Lee, L. Becker, J.M. Schmitt, Q. Huang, J.G. Fujimoto, and H. Mashimo, Three-dimensional optical coherence tomography examination of non-ablated Barrett’s esophagus and buried glands beneath neo-squamous epithelium following radiofrequency ablation. Endoscopy, 41(9):773-776, 2009.(PDF)
  27. T.-H. Tsai, C. Zhou, D.C. Adler, and J.G. Fujimoto. Frequency Comb Swept Lasers, Opt. Express, 17(23):21257-21270, 2009.(PDF)
  28. E.M. Buckley, N.M. Cook, T. Durduran, M.N. Kim, C. Zhou, R. Choe, G.Q. Yu, S. Shultz, C.M. Sehgal, D.J. Licht, P.H. Arger, M.E. Putt, H. Hurt, and A.G. Yodh. Cerebral hemodynamics in preterm infants during positional intervention measured with diffuse correlation spectroscopy and transcranial Doppler ultrasound. Opt. Express, 17(15):12571-12581, 2009.(PDF)
  29. C. Zhou, T. Shimazu, T. Durduran, J. Luckl, D.Y. Kimberg, G.Q. Yu, X.H. Chen, J.A. Detre, A.G. Yodh, and J.H. Greenberg. Acute functional recovery of cerebral blood flow following forebrain ischemia in the rat. J. Cereb. Blood Flow Metab., 28(7):1275-1284, 2008.(PDF)
  30. C. Zhou, R. Choe, N. Shah, T. Durduran, G.Q. Yu, A. Durkin, D. Hsiang, R. Mehta, J. Butler, A. Cerussi, B.J. Tromberg, and A.G. Yodh. Diffuse optical monitoring of blood flow and oxygenation in human breast cancer during early stages of neoadjuvant chemotherapy. J. Biomed. Opt., 12(5):051903, 2007.(PDF)
  31. G. Q. Yu, T. Floyd, T. Durduran, C. Zhou, J. J. Wang, J. A. Detre, and A. G. Yodh. Concurrent diffuse optical and MRI measurements of blood flow in human skeletal muscle. Opt. Express, 15(3):1064-1075, 2007.(PDF)
  32. U. Sunar, S. Makonnen, C. Zhou, T. Durduran, G.Q. Yu, H.W. Wang, W.M.F. Lee, and A.G. Yodh. Hemodynamic responses to antivascular therapy and ionizing radiation assessed by diffuse optical spectroscopies. Opt. Express, 15(23):15507-15516, 2007.(PDF)
  33. C. Zhou, G.Q. Yu, D. Furuya, J.H. Greenberg, A.G. Yodh, and T. Durduran. Diffuse optical correlation tomography of cerebral blood flow during cortical spreading depression in rat brain. Opt. Express, 14(3):1125-1144, 2006.(PDF)
  34. G. Q. Yu, T. Durduran, C. Zhou, T. C. Zhu, J. C. Finlay, T. M. Busch, S. B. Malkowicz, S. M. Hahn, and A. G. Yodh. Real-time in situ monitoring of human prostate photodynamic therapy with diffuse light. Photochem. Photobiol., 82(5):1279-1284, 2006.(PDF)
  35. U. Sunar, H. Quon, T. Durduran, J. Zhang, J. Du, C. Zhou, G.Q. Yu, R. Choe, A. Kilger, R. Lustig, L. Loevner, S. Nioka, B. Chance, and A.G. Yodh. Noninvasive diffuse optical measurement of blood flow and blood oxygenation for monitoring radiation therapy in patients with head and neck tumors: a pilot study. J. Biomed. Opt., 11(6):064021, 2006.(PDF)
  36. G.Q. Yu, T. Durduran, G. Lech, C. Zhou, B. Chance, R.E. Mohler, and A.G. Yodh. Time-dependent blood flow and oxygenation in human skeletal muscles measured with noninvasive near-infrared diffuse optical spectroscopies. J. Biomed. Opt., 10(2):024027, 2005.(PDF)
  37. G.Q. Yu, T. Durduran, C. Zhou, H.W. Wang, M.E. Putt, H.M. Saunders, C.M. Sehgal, E. Glatstein, A.G. Yodh, and T.M. Busch. Noninvasive monitoring of murine tumor blood flow during and after photodynamic therapy provides early assessment of therapeutic efficacy. Clin. Cancer Res., 11(9):3543-3552, 2005.(PDF)
  38. T. Durduran, R. Choe, G.Q. Yu, C. Zhou, J.C. Tchou, B.J. Czerniecki, and A.G. Yodh. Diffuse optical measurement of blood flow in breast tumors. Opt. Lett., 30(21):2915-2917, 2005.(PDF)
  39. T. Durduran, G.Q. Yu, M.G. Burnett, J.A. Detre, J.H. Greenberg, J. Wang, C. Zhou, and A.G. Yodh. Diffuse optical measurement of blood flow, blood oxygenation, and metabolism in a human brain during sensorimotor cortex activation. Opt. Lett., 29(15):1766-1768, 2004.(PDF)
  40. T. Durduran, M.G. Burnett, G.Q. Yu, C. Zhou, D. Furuya, A.G. Yodh, J.A. Detre, and J.H. Greenberg. Spatiotemporal quantification of cerebral blood flow during functional activation in rat somatosensory cortex using laser-speckle flowmetry. J. Cereb. Blood Flow Metab., 24(5):518-525, 2004.(PDF)

Book Chapters

  1. G. Ni, Z. Wang and C. Zhou, Optical coherence tomography in biomedicine, in Biomedical Optical Imaging, R. Choe and J. Xia, Eds., AIP Publishing, https://doi.org/10.1063/9780735423794_009, 2021.
  2. Y. Huang, H. Huang, Z. Jiang, L. Li, W. Lau, M. El-Aasser, H. D. Ou-Yang and C. Zhou, Nondestructive Characterization of Drying Processes of Colloidal Droplets and Latex Coats Using Optical Coherence Tomography, in Optical Coherence Tomography and Its Non-medical Applications, Michael Wang, Eds., 2019, ISBN 978-1-78984-262-3.
  3. A. Alex, E.D. Tait Wojno, D. Artis, and C. Zhou, Label-free imaging of eosinophilic esophagitis mouse models using optical coherence tomography, in Methods in Molecular Biology, Andrei Ivanov, Eds., Springer, 1422:127-36, 2016, ISBN 9781493936014.
  4. T. Xu, C. Zhou, X.L. Huang, Model-based Curvilinear Network Extraction toward Quantitative Microscopy, Biomedical Image Segmentation: Advances and Trends, Ayman El-Baz, Eds., CRC Press, 2016, ISBN 9781482258554.
  5. C. Zhou, J.G. Fujimoto, T.-H. Tsai, and H. Mashimo, Endoscopic Optical Coherence Tomography and Clinical Applications, Optical Coherence Tomography: Technology and Applications, 2nd Ed., J.G. Fujimoto and W. Drexler, Eds., Springer-Verlag, Berlin, Heidelberg, 2015.
  6. A.D. Aguirre, C. Zhou, H.-C. Lee, O.O. Ahsen, and J.G. Fujimoto, Optical Coherence Microscopy, in Optical Coherence Tomography: Technology and Applications, 2nd Ed., J.G. Fujimoto and W. Drexler, Eds., Springer-Verlag, Berlin, Heidelberg, 2015.
  7. T. Xu, F. Li, D.-H. Nguyen, C.S. Chen, C. Zhou, X. Huang, Delineating 3D angiogenic sprouting in OCT images via multiple active contours, pp. 231-240, in Augmented Reality Environments for Medical Imaging and Computer-Assisted Interventions, Springer Berlin Heidelberg, 2013.
  8. G.Q. Yu, T. Durduran, C. Zhou, R. Cheng, A.G. Yodh. Near-infrared Diffuse Correlation Spectroscopy (DCS) for Assessment of Tissue Blood Flow. Chapter 13 In: D.A. Boas, C. Pitris, N. Ramanujam, editors. Handbook of Biomedical Optics. Oakland: Taylor and Francis, 2011.