The paper, “A Drosophila heart optical coherence microscopy dataset for automatic video segmentation” provides a dataset of Drosophila heart images and open source code for heart segmentation. Read more here.
Author: amatt
Zlab at BMES 2023
PhD students Fei Wang and Abby Matt presented their work at the Biomedical Engineering Society Conference in Seattle, Washington. We had a great time learning about exciting new research in biomedical engineering and exploring Seattle. Fei presented a poster “High-throughput Longitudinal Monitoring of Human Heart Organoids using Optical Coherence Tomography” and Abby had an oral […]
Summer students win poster awards
Congratulations to Ping-Hsien Lee, Wei-Shan Wong, and David Honig for receiving poster awards for their summer projects. Ping-Hsien and Wei-Shan presented at the WashU Summer Research Symposium, and David presented at the CardS Research Symposium.
3D motion tracking paper now online
Senyue Hao recently published “High dynamic range 3D motion tracking using circular scans with optical coherence tomography” in Biomedical Optics Express. The paper describes a new motion tracking algorithm which can provide compensation for the movement of samples during image acquisition. Read more here.
Dual modality OCT system monitors human heart organoids in vitro
Senyue Hao, Chao Ren, Fei Wang, and Dr. Kibeom Park recently published “Dual-modality imaging system for monitoring human heart organoids beating in vitro” in Optics Letters. The work was done in collaboration with Dr. Aitor Aguirre at Michigan State University, and uses both fluorescence and OCT imaging to capture organoid beating dynamics. More information can […]
OCT provides 3D quantifications of mouse ovarian follicles
Our paper, “Three-dimensional imaging and quantification of mouse ovarian follicles via optical coherence tomography”, was recently published in Biomedical Optics Express. This work was lead by Dr. Marcello Magri Amaral, and showed the promise of SD-OCT as a tool for facilitating the selection of ovarian tissue for cryopreservation. Read more here. Congratulations to all the […]